dlc.L putative ortholog of delta-like protein C precursor (SwissPro) L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dlc.L
Official Full Name: putative ortholog of delta-like protein C precursor (SwissPro) L homeolog
Primary source: Xenbase:XB-GENE-968501
Locus tag: XELAEV_18039430mg
See related: EnsemblRapid:ENSXLAG00005016876
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: dlc; dll3; delta2; delta-2; X-Delta2; x-delta-2
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Genomic context

Location:: chromosome: 8L

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8L	NC_054385.1 (72999598..73011004)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8L	NC_030738.1 (59512975..59524402)

Chromosome 8L - NC_054385.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables Notch binding	IEA Inferred from Electronic Annotation more info
enables calcium ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within Notch signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell communication	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within negative regulation of Notch signaling pathway	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative ortholog of delta-like protein C precursor (SwissPro) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086082.1 → NP_001079551.1 putative ortholog of delta-like protein C precursor (SwissPro) L homeolog precursor

See identical proteins and their annotated locations for NP_001079551.1

Status: PROVISIONAL

Source sequence(s)

BC044262

UniProtKB/TrEMBL

A0A974H7W9, P79941, Q7ZXT4

Related

ENSXLAP00005049707.1, ENSXLAT00005050848.1

Conserved Domains (3) summary

cd00054
Location:308 → 343

EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

pfam01414
Location:139 → 201

DSL; Delta serrate ligand

pfam07657
Location:22 → 80

MNNL; N terminus of Notch ligand