cdkn2aip.L CDKN2A interacting protein L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cdkn2aip.L
Official Full Name: CDKN2A interacting protein L homeolog
Primary source: Xenbase:XB-GENE-984880
Locus tag: XELAEV_18005385mg
See related: EnsemblRapid:ENSXLAG00005006350 AllianceGenome:Xenbase:XB-GENE-984880
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cdkn2aip; cdkn2aip-a; cdkn2aip-b
Summary: Predicted to be located in nucleolus and nucleoplasm. Is expressed in ectoderm; nervous system; and visual system. Orthologous to human CDKN2AIP (CDKN2A interacting protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1L

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (47640313..47645396, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (38396047..38401067, complement)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in nucleolus	IEA Inferred from Electronic Annotation more info
located_in nucleoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein CDKN2AIP homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086078.1 → NP_001079547.1 protein CDKN2AIP homolog A

See identical proteins and their annotated locations for NP_001079547.1

Status: PROVISIONAL

Source sequence(s)

BC044102

UniProtKB/Swiss-Prot

Q7ZXV6

UniProtKB/TrEMBL

A0A974I371

Related

ENSXLAP00005018864.1, ENSXLAT00005019199.1

Conserved Domains (1) summary

pfam11952
Location:24 → 115

XTBD; XRN-Two Binding Domain, XTBD

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

47640313..47645396 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)