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prelid3b.L PRELI domain containing 3B L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379231, updated on 17-Aug-2024

Summary

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Official Symbol
prelid3b.L
Official Full Name
PRELI domain containing 3B L homeolog
Primary source
Xenbase:XB-GENE-17330337
Locus tag
XELAEV_18043544mg
See related
EnsemblRapid:ENSXLAG00005034556
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
slmo2
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Genomic context

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Location:
chromosome: 9_10L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (16434727..16442366)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (16370335..16377991)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene endothelin-3 L homeolog Neighboring gene uncharacterized LOC108701776 Neighboring gene ATP synthase subunit epsilon, mitochondrial Neighboring gene uncharacterized protein MGC69074

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC52717

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PRELI domain containing 3B L homeolog
Names
protein slowmo homolog 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086075.1 → NP_001079544.1  PRELI domain containing 3B L homeolog

    See identical proteins and their annotated locations for NP_001079544.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044087
    UniProtKB/TrEMBL
    A0A974H2I7, Q7ZXW8
    Related
    ENSXLAP00005103359.1, ENSXLAT00005105364.1
    Conserved Domains (1) summary
    pfam04707
    Location:15 → 170
    PRELI; PRELI-like family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    16434727..16442366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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