U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

znrd2.S zinc ribbon domain containing 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379204, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
znrd2.S
Official Full Name
zinc ribbon domain containing 2 S homeolog
Primary source
Xenbase:XB-GENE-6256371
Locus tag
XELAEV_18024166mg
See related
EnsemblRapid:ENSXLAG00005006982 AllianceGenome:Xenbase:XB-GENE-6256371
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
p27; sssca1; sssca1.S
Summary
Orthologous to human ZNRD2 (zinc ribbon domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See znrd2.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (502845..509445, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (490452..497725, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene signal-induced proliferation-associated 1 S homeolog Neighboring gene EH domain binding protein 1 like 1 S homeolog Neighboring gene cornichon family AMPA receptor auxiliary protein 2 S homeolog Neighboring gene splicing factor 3b subunit 2 S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
zinc ribbon domain containing 2 S homeolog
Names
Sjogren syndrome/scleroderma autoantigen 1 S homeolog
Sjogren's syndrome/scleroderma autoantigen 1 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086048.1 → NP_001079517.1  zinc ribbon domain containing 2 S homeolog

    See identical proteins and their annotated locations for NP_001079517.1

    Status: PROVISIONAL

    Source sequence(s)
    BC043979
    UniProtKB/TrEMBL
    Q7ZTP4
    Related
    ENSXLAP00005020338.1, ENSXLAT00005020820.1
    Conserved Domains (2) summary
    PRK12495
    Location:15 → 120
    PRK12495; hypothetical protein; Provisional
    pfam06677
    Location:34 → 71
    Auto_anti-p27; Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    502845..509445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041591145.1 → XP_041447079.1  zinc ribbon domain containing 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8GCR2, A0A974CYE3
    Related
    ENSXLAP00005020367.1, ENSXLAT00005020860.1
    Conserved Domains (2) summary
    PRK12495
    Location:15 → 120
    PRK12495; hypothetical protein; Provisional
    pfam06677
    Location:34 → 71
    Auto_anti-p27; Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.