U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

nipal2.S NIPA-like domain containing 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379185, updated on 4-Nov-2024

Summary

Official Symbol
nipal2.S
Official Full Name
NIPA-like domain containing 2 S homeolog
Primary source
Xenbase:XB-GENE-6251616
Locus tag
XELAEV_18033893mg
See related
EnsemblRapid:ENSXLAG00005005567 AllianceGenome:Xenbase:XB-GENE-6251616
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
npal2; nipal2; nipal2-a; nipal2-b
Summary
Predicted to enable magnesium ion transmembrane transporter activity. Predicted to act upstream of or within magnesium ion transport. Predicted to be located in membrane. Orthologous to human NIPAL2 (NIPA like domain containing 2). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See nipal2.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (115299214..115347858)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (106645701..106694451)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 3 S homeolog Neighboring gene potassium voltage-gated channel modifier subfamily S member 2 S homeolog Neighboring gene reactive intermediate imine deaminase A homolog S homeolog Neighboring gene glutamate-rich protein 5 like S homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC53705

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables magnesium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within magnesium ion transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein LOC379185

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086029.1NP_001079498.1  uncharacterized protein LOC379185

    See identical proteins and their annotated locations for NP_001079498.1

    Status: PREDICTED

    Source sequence(s)
    BC043862
    UniProtKB/TrEMBL
    A0A974CK19, Q7ZYB3
    Related
    ENSXLAP00005016412.1, ENSXLAT00005016708.1
    Conserved Domains (1) summary
    cl23754
    Location:34318
    EamA; EamA-like transporter family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    115299214..115347858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)