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pnlip.L pancreatic lipase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379159, updated on 4-Nov-2024

Summary

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Official Symbol
pnlip.L
Official Full Name
pancreatic lipase L homeolog
Primary source
Xenbase:XB-GENE-6054630
Locus tag
XELAEV_18034269mg
See related
EnsemblRapid:ENSXLAG00005034236 AllianceGenome:Xenbase:XB-GENE-6054630
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pnlip
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Genomic context

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See pnlip.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (3810672..3824714)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (3820497..3833958)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene inactive pancreatic lipase-related protein 1 Neighboring gene inactive pancreatic lipase-related protein 1-like Neighboring gene pancreatic lipase-like Neighboring gene uncharacterized protein MGC116497

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC52890, MGC130823

General protein information

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Preferred Names
pancreatic lipase L homeolog; pancreatic lipase-related protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    3810672..3824714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041570145.1 → XP_041426079.1  pancreatic lipase-related protein 2

    UniProtKB/TrEMBL
    A0A8J1LAR2, A0A974CE36
    Related
    ENSXLAP00005102485.1, ENSXLAT00005104480.1
    Conserved Domains (2) summary
    cd00707
    Location:52 → 345
    Pancreat_lipase_like; Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the ...
    cl00011
    Location:355 → 466
    PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001086003.1: Suppressed sequence

    Description
    NM_001086003.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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