znf750.L zinc finger protein 750 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: znf750.L
Official Full Name: zinc finger protein 750 L homeolog
Primary source: Xenbase:XB-GENE-5775750
Locus tag: XELAEV_18044173mg
See related: EnsemblRapid:ENSXLAG00005018180
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: sg1; BENI; znf750; znf750-a; znf750-b
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (51095696..51102589, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (40556307..40563200, complement)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

BENI expression is regulated by activin-like signaling, and that this regulation is crucial for Xbra expression and convergent extension during gastrulation.
Title: A novel gene, BENI is required for the convergent extension during Xenopus laevis gastrulation.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific	ISS Inferred from Sequence or Structural Similarity more info
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	ISS Inferred from Sequence or Structural Similarity more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables promoter-specific chromatin binding	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cell differentiation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within epidermis development	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: zinc finger protein 750

Names: Protein ZNF750; brachyury expression nuclear inhibitor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001085997.1 → NP_001079466.1 zinc finger protein 750

See identical proteins and their annotated locations for NP_001079466.1

Status: PROVISIONAL

Source sequence(s)

BC043737

UniProtKB/Swiss-Prot

Q32N19, Q7ZYL3

UniProtKB/TrEMBL

A0A974H314, B3A0S8

Related

ENSXLAP00005053627.1, ENSXLAT00005054800.1

Conserved Domains (1) summary

pfam15269
Location:5 → 58

zf-C2H2_7; Zinc-finger

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

51095696..51102589 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)