snupn.L snurportin 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: snupn.L
Official Full Name: snurportin 1 L homeolog
Primary source: Xenbase:XB-GENE-967849
Locus tag: XELAEV_18018051mg
See related: EnsemblRapid:ENSXLAG00005035916
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: kpnbl; rnut1; snupn; snupna; snurportin1
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 3L

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (98877270..98892806)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (83568555..83584036)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nuclear import signal receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein import into nucleus	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within snRNA import into nucleus	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: snurportin 1 L homeolog

Names: snurportin 1 a

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001085993.1 → NP_001079462.1 snurportin 1 L homeolog

See identical proteins and their annotated locations for NP_001079462.1

Status: PROVISIONAL

Source sequence(s)

BC043630

UniProtKB/TrEMBL

A0A974DEE1, Q7ZYM4

Conserved Domains (3) summary

cd09232
Location:102 → 286

Snurportin-1_C; C-terminal m3G cap-binding domain of nuclear import adaptor snurportin-1

pfam11538
Location:25 → 64

Snurportin1; Snurportin1

cl00379
Location:20 → 101

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...