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krt12.4.S Keratin 12, gene 4 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379143, updated on 17-Aug-2024

Summary

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Official Symbol
krt12.4.S
Official Full Name
Keratin 12, gene 4 S homeolog
Primary source
Xenbase:XB-GENE-17330213
Locus tag
XELAEV_18045888mg
See related
EnsemblRapid:ENSXLAG00005025732
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
EpK; K81; EpiK; ck81; xK81; cytok; xk81a; epiker; xk81a1; E-keratin; cytokeratin; epi-keratin
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Genomic context

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See krt12.4.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (1162790..1167191)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (1074235..1078637)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene keratin 12, gene 2 S homeolog Neighboring gene keratin 20 S homeolog Neighboring gene keratin 12, gene 5 S homeolog Neighboring gene keratin 12, gene 6 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53311

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within epithelial cell differentiation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within intermediate filament organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Keratin, type I cytoskeletal 47 kDa-like
Names
Epidermis-specific keratin
epidermal keratin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085987.1 → NP_001079456.1  Keratin, type I cytoskeletal 47 kDa-like

    See identical proteins and their annotated locations for NP_001079456.1

    Status: PROVISIONAL

    Source sequence(s)
    BC042927
    UniProtKB/TrEMBL
    A0A974H0C9, Q7ZYN9
    Related
    ENSXLAP00005076472.1, ENSXLAT00005078063.1
    Conserved Domains (1) summary
    pfam00038
    Location:15 → 327
    Filament; Intermediate filament protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    1162790..1167191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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