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anp32c.L acidic nuclear phosphoprotein 32 family member C L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379120, updated on 4-Nov-2024

Summary

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Official Symbol
anp32c.L
Official Full Name
acidic nuclear phosphoprotein 32 family member C L homeolog
Primary source
Xenbase:XB-GENE-17337640
Locus tag
XELAEV_18006314mg
See related
EnsemblRapid:ENSXLAG00005015454 AllianceGenome:Xenbase:XB-GENE-17337640
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
anp32b
Summary
Predicted to enable histone binding activity. Predicted to act upstream of or within regulation of apoptotic process. Predicted to be located in nucleus. Orthologous to human ANP32CP (acidic nuclear phosphoprotein 32 family member C, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See anp32c.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (111217035..111225592)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (99166290..99174916)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 L homeolog Neighboring gene alkaline ceramidase 1 L homeolog Neighboring gene zinc finger protein 414 L homeolog Neighboring gene myosin IF L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anp32 family of proteins containing leucine-rich repeats. Matilla A, et al. Cerebellum, 2005. PMID 15895553
  2. Two distinct modes of DNMT1 recruitment ensure stable maintenance DNA methylation. Nishiyama A, et al. Nat Commun, 2020 Mar 6. PMID 32144273, Free PMC Article
  3. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acidic leucine-rich nuclear phosphoprotein 32 family member B
Names
acidic (leucine-rich) nuclear phosphoprotein 32 family, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085964.1 → NP_001079433.1  acidic leucine-rich nuclear phosphoprotein 32 family member B

    See identical proteins and their annotated locations for NP_001079433.1

    Status: PROVISIONAL

    Source sequence(s)
    BC042250
    UniProtKB/Swiss-Prot
    Q8AVC1
    Related
    ENSXLAP00005045384.1, ENSXLAT00005046483.1
    Conserved Domains (2) summary
    sd00035
    Location:90 → 113
    LRR_NTF; leucine-rich repeat [structural motif]
    pfam12799
    Location:88 → 130
    LRR_4; Leucine Rich repeats (2 copies)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    111217035..111225592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8AVC1.1 GenPept UniProtKB/Swiss-Prot:Q8AVC1

Gene LinkOut

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