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ncoa5.S nuclear receptor coactivator 5 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379118, updated on 4-Nov-2024

Summary

Official Symbol
ncoa5.S
Official Full Name
nuclear receptor coactivator 5 S homeolog
Primary source
Xenbase:XB-GENE-17332710
Locus tag
XELAEV_18046520mg
See related
EnsemblRapid:ENSXLAG00005034511 AllianceGenome:Xenbase:XB-GENE-17332710
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cia
Summary
Predicted to act upstream of or within regulation of signal transduction. Predicted to be located in nucleoplasm. Orthologous to human NCOA5 (nuclear receptor coactivator 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ncoa5.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (31634343..31653075)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (26159438..26178171)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene cadherin 22 S homeolog Neighboring gene CD40 molecule, TNF receptor superfamily member 5 S homeolog Neighboring gene solute carrier family 12 member 5 S homeolog Neighboring gene matrix metallopeptidase 9 gene 2 S homeolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
nuclear receptor coactivator 5 S homeolog
Names
Nuclear receptor coactivator 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001085962.1NP_001079431.1  nuclear receptor coactivator 5 S homeolog

    See identical proteins and their annotated locations for NP_001079431.1

    Status: PROVISIONAL

    Source sequence(s)
    BC042244
    UniProtKB/TrEMBL
    A0A974BT77, Q8AVJ4
    Related
    ENSXLAP00005103237.1, ENSXLAT00005105242.1
    Conserved Domains (1) summary
    PRK12678
    Location:3165
    PRK12678; transcription termination factor Rho; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    31634343..31653075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)