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tial1.L TIA1 cytotoxic granule-associated RNA binding protein-like 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 378931, updated on 17-Aug-2024

Summary

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Official Symbol
tial1.L
Official Full Name
TIA1 cytotoxic granule-associated RNA binding protein-like 1 L homeolog
Primary source
Xenbase:XB-GENE-17339698
Locus tag
XELAEV_18034300mg
See related
EnsemblRapid:ENSXLAG00005035980
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tcbp; tiar; tial1-a; tial1-b
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Genomic context

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See tial1.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (5036443..5057806)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (5059582..5080964)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene inositol polyphosphate-5-phosphatase F L homeolog Neighboring gene BAG cochaperone 3 L homeolog Neighboring gene regulator of G-protein signaling 10 L homeolog Neighboring gene G protein-coupled receptor kinase 5 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of FUSE-binding proteins as interacting partners of TIA proteins. Rothé F, et al. Biochem Biophys Res Commun, 2006 Apr 28. PMID 16527256
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nucleolysin TIAR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    5036443..5057806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018225001.2 → XP_018080490.1  nucleolysin TIAR isoform X1

    UniProtKB/TrEMBL
    A0A1L8FIA8, A0A974CE65, Q7ZX99
    Related
    ENSXLAP00005107641.1, ENSXLAT00005109775.1

  2. XM_041570153.1 → XP_041426087.1  nucleolysin TIAR isoform X2

    UniProtKB/TrEMBL
    A0A8J1L967
    Conserved Domains (2) summary
    TIGR01628
    Location:1 → 134
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cl17169
    Location:74 → 146
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein Strain
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