KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: KHDRBS1provided by CGNC
Full Name: KH RNA binding domain containing, signal transduction associated 1provided by CGNC
Primary source: CGNC:2378
See related: Ensembl:ENSGALG00010017322
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	23	NC_052554.1 (5445215..5466051)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	23	NC_052595.1 (5208600..5229464)

Chromosome 23 - NC_052554.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables mRNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables poly(A) binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of alternative mRNA splicing, via spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: KH domain-containing, RNA-binding, signal transduction-associated protein 1

Names: KH domain containing, RNA binding, signal transduction associated 1; sam68; src-associated in mitosis 68 kDa protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001397326.2 → NP_001384255.2 KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform 2

Status: VALIDATED

Description

Transcript Variant: This variant (2) has the long first exon and the long fifth exon.

Source sequence(s)

JAENSK010000339

UniProtKB/TrEMBL

A0A8V0YTR7

Related

ENSGALP00010024429.1, ENSGALT00010041777.1
NM_204230.2 → NP_989561.2 KH domain-containing, RNA-binding, signal transduction-associated protein 1 isoform 1

Status: VALIDATED

Description

Transcript Variant: This variant (1) has the short first exon and the short fifth exon.

Source sequence(s)

AY057837, BM491638, BU133239, BU401640, BU414044, JAENSK010000339

UniProtKB/Swiss-Prot

Q8UUW7

Conserved Domains (1) summary

COG5176
Location:138 → 259

MSL5; Splicing factor (branch point binding protein) [RNA processing and modification]