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hs6st1.S heparan sulfate 6-O-sulfotransferase 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 373566, updated on 18-Sep-2024

Summary

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Official Symbol
hs6st1.S
Official Full Name
heparan sulfate 6-O-sulfotransferase 1 S homeolog
Primary source
Xenbase:XB-GENE-953851
Locus tag
XELAEV_18030030mg
See related
EnsemblRapid:ENSXLAG00005023839
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
6OST; hs6st1; hs6st1-A
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Genomic context

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See hs6st1.S in Genome Data Viewer
Location:
chromosome: 5S
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (120871589..120944336, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (114170845..114243324, complement)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene lymphotactin Neighboring gene ephrin type-A receptor 3 Neighboring gene uncharacterized LOC121394318 Neighboring gene F-box protein 25 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Specific heparan sulfate structures involved in retinal axon targeting. Irie A, et al. Development, 2002 Jan. PMID 11782401

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 1
Names
heparan sulfate 6-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    120871589..120944336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018265908.2 → XP_018121397.1  heparan-sulfate 6-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A8J0VGI9, A0A974CUV3
    Related
    ENSXLAP00005070557.1, ENSXLAT00005072098.1
Nucleotide Protein Strain
Heading Accession and Version

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