rab14 RAB14, member RAS oncogene family [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rab14provided by ZNC
Official Full Name: RAB14, member RAS oncogene familyprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030826-20
See related: Ensembl:ENSDARG00000074246 AllianceGenome:ZFIN:ZDB-GENE-030826-20
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb731; fc26g11; fj47f07; fj68a01; wu:fc26g11; wu:fj47f07; wu:fj68a01
Summary: Predicted to enable GTPase activity. Predicted to be involved in Golgi to endosome transport; intracellular protein transport; and phagolysosome assembly involved in apoptotic cell clearance. Predicted to act upstream of or within defense response to bacterium; endocytic recycling; and phagosome maturation. Predicted to be located in Golgi apparatus and endosome. Predicted to be active in early endosome and phagocytic vesicle. Is expressed in several structures, including axis; nervous system; neural tube; notochord; and trigeminal placode. Orthologous to human RAB14 (RAB14, member RAS oncogene family). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 5

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (63390322..63399894)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (62696931..62706503)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fa95h12.x1 (e-PCR)
- UniSTS:202603

fj68a01.x1 (e-PCR)
- UniSTS:188780

fc26g11.x1 (e-PCR)
- UniSTS:203904

fj47f07.x1 (e-PCR)
- UniSTS:188604

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables G protein activity	IEA Inferred from Electronic Annotation more info
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IBA Inferred from Biological aspect of Ancestor more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in Golgi to endosome transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within Golgi to endosome transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within defense response to bacterium	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within endocytic recycling	IEA Inferred from Electronic Annotation more info
involved_in intracellular protein transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in phagolysosome assembly	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within phagosome maturation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in early endosome	IBA Inferred from Biological aspect of Ancestor more info
located_in early endosome membrane	IEA Inferred from Electronic Annotation more info
is_active_in endomembrane system	IBA Inferred from Biological aspect of Ancestor more info
is_active_in phagocytic vesicle	IBA Inferred from Biological aspect of Ancestor more info
located_in phagocytic vesicle	IEA Inferred from Electronic Annotation more info
located_in recycling endosome	IEA Inferred from Electronic Annotation more info
located_in trans-Golgi network	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ras-related protein Rab-14

NP_958903.1

EC 3.6.5.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.