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Idgf5 Imaginal disc growth factor 5 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 37104, updated on 2-Nov-2024

Summary

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Official Symbol
Idgf5provided by FlyBase
Official Full Name
Imaginal disc growth factor 5provided by FlyBase
Primary source
FLYBASE:FBgn0064237
Locus tag
Dmel_CG5154
See related
AllianceGenome:FB:FBgn0064237
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5154; Cht14; Dmel\CG5154; DmIDGF5; IDGF; IDGF-5; idgf5; IDGF5
Summary
Enables imaginal disc growth factor receptor binding activity. Involved in chitin-based cuticle development; imaginal disc development; and wound healing. Located in extracellular region. Is expressed in adult head. Human ortholog(s) of this gene implicated in asthma and schizophrenia. Orthologous to several human genes including CHIT1 (chitinase 1); CHI3L1 (chitinase 3 like 1); and CHI3L2 (chitinase 3 like 2). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

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See Idgf5 in Genome Data Viewer
Location:
55C4-55C6; 2-85 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18393666..18395282)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14281171..14282787)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Bomanin Short 5 Neighboring gene Bomanin Short 6 Neighboring gene Glutathione S transferase E10 Neighboring gene Glutathione S transferase E1 Neighboring gene Glutathione S transferase E2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of imaginal disc growth factor-2. A member of a new family of growth-promoting glycoproteins from Drosophila melanogaster. Varela PF, et al. J Biol Chem, 2002 Apr 12. PMID 11821393
  2. CO2 exposure drives a rapid pH response in live adult Drosophila. Zimmerman SG, et al. PLoS One, 2024. PMID 38625910, Free PMC Article
  3. A new family of growth factors produced by the fat body and active on Drosophila imaginal disc cells. Kawamura K, et al. Development, 1999 Jan. PMID 9847235
  4. Imaginal disk growth factors are Drosophila chitinase-like proteins with roles in morphogenesis and CO2 response. Sustar AE, et al. Genetics, 2023 Feb 9. PMID 36576887, Free PMC Article
  5. Expansion of Imaginal Disc Growth Factor Gene Family in Diptera Reflects the Evolution of Novel Functions. Zurovcova M, et al. Insects, 2019 Oct 20. PMID 31635152, Free PMC Article

See all (47) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
enables imaginal disc growth factor receptor binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in chitin catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in chitin-based cuticle development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in imaginal disc development IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in wound healing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region HDA PubMed 
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular region NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
imaginal disc growth factor 5
Names
CG5154-PA
Idgf5-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    18393666..18395282
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137477.4 → NP_611321.3  imaginal disc growth factor 5 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_611321.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8T0R7, Q9V8G4
    UniProtKB/TrEMBL
    B5RJG0, E1UIC3, E1UIC4, E1UIC6
    Related
    FBpp0085849
    Conserved Domains (2) summary
    cd02873
    Location:30 → 444
    GH18_IDGF; The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are ...
    smart00636
    Location:30 → 423
    Glyco_18; Glyco_18 domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8T0R7.3 Q8T0R7

Gene LinkOut

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