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RpL18A Ribosomal protein L18A [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36985, updated on 2-Nov-2024

Summary

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Official Symbol
RpL18Aprovided by FlyBase
Official Full Name
Ribosomal protein L18Aprovided by FlyBase
Primary source
FLYBASE:FBgn0010409
Locus tag
Dmel_CG6510
See related
AllianceGenome:FB:FBgn0010409
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:Posey75; CG6510; Dmel\CG6510; L18; L18a; L18A; L20e; Rpl18A; RpL18a; RPL18a
Summary
A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPL18A (ribosomal protein L18a). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

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See RpL18A in Genome Data Viewer
Location:
54C3-54C3; 2-83 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17546406..17547462, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13433911..13434967, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Coiled-coil and C2 domain containing 2A Neighboring gene uncharacterized protein Neighboring gene cyclophilin-33 Neighboring gene Misexpression suppressor of ras 4 Neighboring gene Kinesin-like protein at 54D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila ribosomal protein L18a: cDNA sequence, expression and chromosomal localization of the gene. Ntwasa M, et al. Biochim Biophys Acta, 1994 Jun 21. PMID 8018724
  2. A new family of cyclophilins with an RNA recognition motif that interact with members of the trx/MLL protein family in Drosophila and human cells. Anderson M, et al. Dev Genes Evol, 2002 Apr. PMID 11976948
  3. Structural and functional diversity of lysyl oxidase and the LOX-like proteins. Molnar J, et al. Biochim Biophys Acta, 2003 Apr 11. PMID 12686136
  4. Nucleosomal core histones mediate dynamic regulation of poly(ADP-ribose) polymerase 1 protein binding to chromatin and induction of its enzymatic activity. Pinnola A, et al. J Biol Chem, 2007 Nov 2. PMID 17827147
  5. Ribosome components are associated with sites of transcription. Brogna S, et al. Mol Cell, 2002 Jul. PMID 12150910

See all (60) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit TAS
Traceable Author Statement
more info
 PubMed 
located_in cytosolic ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal protein L18A
Names
CG6510-PA
RpL18A-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    17546406..17547462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079050.3 → NP_523774.1  ribosomal protein L18A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523774.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P41093, Q9V840
    Related
    FBpp0086103
    Conserved Domains (1) summary
    COG2157
    Location:69 → 153
    RPL20A; Ribosomal protein L20A (L18A) [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P41093.1 P41093

Gene LinkOut

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