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rassf7b Ras association domain family member 7b [ Danio rerio (zebrafish) ]

Gene ID: 368288, updated on 12-Sep-2024

Summary

Official Symbol
rassf7bprovided by ZNC
Official Full Name
Ras association domain family member 7bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030429-1
See related
Ensembl:ENSDARG00000003193 AllianceGenome:ZFIN:ZDB-GENE-030429-1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
sb:cb262; zgc:55456
Summary
Predicted to act upstream of or within regulation of microtubule cytoskeleton organization and signal transduction. Is expressed in several structures, including EVL; Kupffer's vesicle; forerunner cell group; nervous system; and periderm. Orthologous to human RASSF7 (Ras association domain family member 7). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See rassf7b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (49654588..49690676)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (49381812..49417900)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene tumor susceptibility 101b Neighboring gene HRas proto-oncogene, GTPase b Neighboring gene si:ch211-210p4.6 Neighboring gene achaete-scute family bHLH transcription factor 1b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
ras association domain-containing protein 7b
Names
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_197942.1NP_922933.1  ras association domain-containing protein 7b

    See identical proteins and their annotated locations for NP_922933.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044177
    UniProtKB/TrEMBL
    Q803V4
    Related
    ENSDARP00000027148.5, ENSDART00000025451.7
    Conserved Domains (1) summary
    cl00155
    Location:179
    UBQ; Ubiquitin-like proteins

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    49654588..49690676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005166464.5XP_005166521.1  ras association domain-containing protein 7b isoform X1

    See identical proteins and their annotated locations for XP_005166521.1

    UniProtKB/TrEMBL
    A0A8M6YZ45, F1QJA9
    Related
    ENSDARP00000144476.1, ENSDART00000176372.2
    Conserved Domains (1) summary
    cl00155
    Location:179
    UBQ; Ubiquitin-like proteins
  2. XM_005166462.5XP_005166519.1  ras association domain-containing protein 7b isoform X1

    See identical proteins and their annotated locations for XP_005166519.1

    UniProtKB/TrEMBL
    A0A8M6YZ45, F1QJA9
    Conserved Domains (1) summary
    cl00155
    Location:179
    UBQ; Ubiquitin-like proteins
  3. XM_017356819.3XP_017212308.1  ras association domain-containing protein 7b isoform X1

    UniProtKB/TrEMBL
    A0A8M6YZ45, F1QJA9
    Conserved Domains (1) summary
    cl00155
    Location:179
    UBQ; Ubiquitin-like proteins