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RpS23 Ribosomal protein S23 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36576, updated on 2-Nov-2024

Summary

Official Symbol
RpS23provided by FlyBase
Official Full Name
Ribosomal protein S23provided by FlyBase
Primary source
FLYBASE:FBgn0033912
Locus tag
Dmel_CG8415
See related
AllianceGenome:FB:FBgn0033912
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:Posey158; anon-EST:Posey63; CG8415; CT24703; Dmel\CG8415; Rp S23; Rps23; RPS23; S12
Summary
A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Part of cytosolic small ribosomal subunit. Is expressed in adult head and adult heart. Used to study brachycephaly, trichomegaly, and developmental delay. Human ortholog(s) of this gene implicated in brachycephaly, trichomegaly, and developmental delay. Orthologous to human RPS23 (ribosomal protein S23). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See RpS23 in Genome Data Viewer
Location:
50E4-50E4; 2-69 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14215096..14216627, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10102601..10104132, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Vesicular GABA Transporter Neighboring gene Sox box protein 15 Neighboring gene mir-308 stem loop Neighboring gene uncharacterized protein Neighboring gene Optic atrophy 1 Neighboring gene mir-1016 stem loop

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
PubMed 
involved_in cytoplasmic translation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
PubMed 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in cytosolic ribosome IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytosolic small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of cytosolic small ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
is_active_in ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal protein S23
Names
CG8415-PA
CG8415-PB
RpS23-PA
RpS23-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    14215096..14216627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137095.3NP_610939.2  ribosomal protein S23, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610939.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8T3U2, Q9V6Z0
    UniProtKB/TrEMBL
    A0A0B4LFD9
    Related
    FBpp0086701
    Conserved Domains (1) summary
    PTZ00067
    Location:1143
    PTZ00067; 40S ribosomal S23; Provisional
  2. NM_001299481.1NP_001286410.1  ribosomal protein S23, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001286410.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8T3U2, Q9V6Z0
    UniProtKB/TrEMBL
    A0A0B4LFD9
    Conserved Domains (1) summary
    PTZ00067
    Location:1143
    PTZ00067; 40S ribosomal S23; Provisional