U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG4679 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 36466, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
CG4679provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0033816
Locus tag
Dmel_CG4679
See related
AllianceGenome:FB:FBgn0033816
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4679; RE17985p
Summary
Predicted to enable rRNA binding activity and ribosomal small subunit binding activity. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Is expressed in several structures, including adult head; embryonic/larval midgut primordium; epithelial tube; gut section; and mesoderm. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 51. Orthologous to human PTCD3 (pentatricopeptide repeat domain 3). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG4679 in Genome Data Viewer
Location:
49F11-49F11; 2-68 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13237256..13239468, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9124761..9126973, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Quiescin sulfhydryl oxidase 1 Neighboring gene uncharacterized protein Neighboring gene Glutathione S transferase E14 Neighboring gene long non-coding RNA:CR45278

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A Drosophila melanogaster ortholog of pentatricopeptide repeat domain 3 ( PTCD3 ) is essential for development. Imura E, et al. MicroPubl Biol, 2023. PMID 38074476, Free PMC Article
  2. The PPR domain of mitochondrial RNA polymerase is an exoribonuclease required for mtDNA replication in Drosophila melanogaster. Liu Y, et al. Nat Cell Biol, 2022 May. PMID 35449456
  3. Evolutionarily Conserved Roles for Apontic in Induction and Subsequent Decline of Cyclin E Expression. Wang XF, et al. iScience, 2020 Aug 21. PMID 32736066, Free PMC Article
  4. Pri peptides are mediators of ecdysone for the temporal control of development. Chanut-Delalande H, et al. Nat Cell Biol, 2014 Nov. PMID 25344753
  5. RBF binding to both canonical E2F targets and noncanonical targets depends on functional dE2F/dDP complexes. Korenjak M, et al. Mol Cell Biol, 2012 Nov. PMID 22927638, Free PMC Article

See all (35) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables rRNA binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables ribosomal small subunit binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ribosomal small subunit binding IEA
Inferred from Electronic Annotation
more info
  
enables ribosomal small subunit binding ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
  
involved_in mitochondrial translation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG4679-PA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    13237256..13239468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_137010.3 → NP_610854.1  uncharacterized protein Dmel_CG4679 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_610854.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A1Z9A8, Q8MRC2, T2FGD8
    Related
    FBpp0086872
    Conserved Domains (2) summary
    PLN03218
    Location:210 → 348
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:228 → 255
    PPR; PPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z9A8.1 A1Z9A8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Chemical Information
Molecular Biology Databases
Research Materials
Tools
Miscellaneous