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RTA2 phospholipid-translocating ATPase [ Candida albicans SC5314 ]

Gene ID: 3646567, updated on 30-Nov-2023

Summary

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Gene symbol
RTA2
Gene description
phospholipid-translocating ATPase
Locus tag
CAALFM_C206470WA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See RTA2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_032090.1 (1317087..1318448)

Chromosome 2 - NC_032090.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Rta3p Neighboring gene tRNA (guanine(9)-N(1))-methyltransferase Neighboring gene peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032090.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  2. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
  3. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in fungal-type vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid-translocating ATPase
XP_711831.1
  • Flippase involved in sphingolipid long chain base release; mediates calcineurin-dependent ER stress response and resistance to azoles; Plc1p, Ca2+, calcineurin-regulated

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032090.1 Reference assembly

    Range
    1317087..1318448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_706739.1 → XP_711831.1  phospholipid-translocating ATPase [Candida albicans SC5314]

    See identical proteins and their annotated locations for XP_711831.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4YIV8, Q59Q40
    Conserved Domains (1) summary
    pfam04479
    Location:148 → 404
    RTA1; RTA1 like protein
Nucleotide Protein
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