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CPH1 homeodomain family transcription factor [ Candida albicans SC5314 ]

Gene ID: 3644468, updated on 30-Nov-2023

Summary

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Gene symbol
CPH1
Gene description
homeodomain family transcription factor
Locus tag
CAALFM_C107370CA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CPH1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_032089.1 (1590522..1592492, complement)

Chromosome 1 - NC_032089.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Gpx3p Neighboring gene putative serine/threonine protein kinase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032089.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A CUG codon adapted two-hybrid system for the pathogenic fungus Candida albicans. Stynen B, et al. Nucleic Acids Res, 2010 Oct. PMID 20719741, Free PMC Article
  2. Mapping the Hsp90 genetic interaction network in Candida albicans reveals environmental contingency and rewired circuitry. Diezmann S, et al. PLoS Genet, 2012. PMID 22438817, Free PMC Article
  3. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  4. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article
  5. The diploid genome sequence of Candida albicans. Jones T, et al. Proc Natl Acad Sci U S A, 2004 May 11. PMID 15123810, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of pseudohyphal growth IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sexual reproduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ste12p-Dig1p-Dig2p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Tec1p-Ste12p-Dig1p complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeodomain family transcription factor
XP_713877.1
  • Transcription factor; for mating, filamentation on solid media, pheromone-stimulated biofilms; in pathway with Ess1, Czf1; required with Efg1 for host cytokine response; regulates galactose metabolism genes; rat cathether biofilm repressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032089.1 Reference assembly

    Range
    1590522..1592492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_708784.2 → XP_713877.1  homeodomain family transcription factor [Candida albicans SC5314]

    See identical proteins and their annotated locations for XP_713877.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A0A1D8PE14, P43079, Q59WD6, Q59WZ4
    UniProtKB/TrEMBL
    C4YDT4
    Conserved Domains (1) summary
    pfam02200
    Location:45 → 154
    STE; STE like transcription factor
Nucleotide Protein
Heading Accession and Version

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