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RLM1 Rlm1p [ Candida albicans SC5314 ]

Gene ID: 3635703, updated on 30-Nov-2023

Summary

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Gene symbol
RLM1
Gene description
Rlm1p
Locus tag
CAALFM_C401260WA
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Candida albicans SC5314 (strain: SC5314, nat-host: Homo sapiens, culture-collection: ATCC:MYA-2876)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See RLM1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_032092.1 (253002..254807)

Chromosome 4 - NC_032092.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Nat4p Neighboring gene ribosomal 40S subunit protein S6A Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032092.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High variability within Candida albicans transcription factor RLM1: Isolates from vulvovaginal infections show a clear bias toward high molecular weight alleles. Carvalho-Pereira J, et al. Med Mycol, 2018 Jul 1. PMID 29420774
  2. Participation of Candida albicans transcription factor RLM1 in cell wall biogenesis and virulence. Delgado-Silva Y, et al. PLoS One, 2014. PMID 24466000, Free PMC Article
  3. Transcriptional regulation of the caspofungin-induced cell wall damage response in Candida albicans. Heredia MY, et al. Curr Genet, 2020 Dec. PMID 32876716, Free PMC Article
  4. Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure. Muzzey D, et al. Genome Biol, 2013. PMID 24025428, Free PMC Article
  5. Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes. van het Hoog M, et al. Genome Biol, 2007. PMID 17419877, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Transcriptional regulation of the caspofungin-induced cell wall damage response in Candida albicans.
    Title: Transcriptional regulation of the caspofungin-induced cell wall damage response in Candida albicans.
  2. Candida albicans isolates from Brazil, Portugal, and Greece vulvovaginal Candida infections present a bias in CAI microsatellite genotypes with higher molecular weight alleles similar to the Chinese genotypes.
    Title: High variability within Candida albicans transcription factor RLM1: Isolates from vulvovaginal infections show a clear bias toward high molecular weight alleles.
  3. In the absence of RLM1 the modifications in the cell wall composition alter yeast interaction with the environment, with consequences in adhesion ability and virulence.
    Title: Participation of Candida albicans transcription factor RLM1 in cell wall biogenesis and virulence.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Rlm1p
XP_722733.2
  • Putative transcription factor; required for wild-type resistance to cell wall perturbation, caspofungin treatment; regulates caspofungin induction of PGA13

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_032092.1 Reference assembly

    Range
    253002..254807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_717640.2 → XP_722733.2  Rlm1p [Candida albicans SC5314]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D8PL95, C4YHV5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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