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EGR_07741 Laminin subunit alpha-1 [ Echinococcus granulosus ]

Gene ID: 36343456, updated on 22-Oct-2023

Summary

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Gene symbol
EGR_07741
Gene description
Laminin subunit alpha-1
Locus tag
EGR_07741
Gene type
protein coding
RNA name
Laminin subunit alpha-1
RefSeq status
PROVISIONAL
Organism
Echinococcus granulosus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus; Echinococcus granulosus group
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Genomic context

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See EGR_07741 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
51

NW_020170465.1Genomic Context describing neighboring genes Neighboring gene Mitogen-activated protein kinase scaffold protein Neighboring gene Guanine nucleotide-binding protein subunit beta-2-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020170465.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the hydatid tapeworm Echinococcus granulosus. Zheng H, et al. Nat Genet, 2013 Oct. PMID 24013640
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_020170465.1 Reference assembly

    Range
    259332..282362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024496990.1 → XP_024348613.1  Laminin subunit alpha-1 [Echinococcus granulosus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A068WKJ5, W6UH21
    Conserved Domains (6) summary
    smart00180
    Location:1161 → 1206
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:1785 → 1834
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:1061 → 1113
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:585 → 783
    Laminin_B; Laminin B (Domain IV)
    pfam00055
    Location:9 → 271
    Laminin_N; Laminin N-terminal (Domain VI)
    cl25732
    Location:1836 → 2337
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases