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Fbxo36 F-box protein 36 [ Rattus norvegicus (Norway rat) ]

Gene ID: 363268, updated on 2-Nov-2024

Summary

Official Symbol
Fbxo36provided by RGD
Official Full Name
F-box protein 36provided by RGD
Primary source
RGD:1307870
See related
EnsemblRapid:ENSRNOG00000017053 AllianceGenome:RGD:1307870
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Orthologous to human FBXO36 (F-box protein 36). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Testes (RPKM 148.3), Lung (RPKM 18.0) and 1 other tissue See more
Orthologs
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Genomic context

See Fbxo36 in Genome Data Viewer
Location:
9q35
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (93490618..93555298)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (86042522..86107220)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (92435872..92500765)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene delta/notch-like EGF repeat containing Neighboring gene uncharacterized LOC120094725 Neighboring gene uncharacterized LOC134480598 Neighboring gene thyroid hormone receptor interactor 12 Neighboring gene uncharacterized LOC102550706 Neighboring gene uncharacterized LOC120094727 Neighboring gene solute carrier family 16, member 14

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108804.1NP_001102274.1  F-box only protein 36

    See identical proteins and their annotated locations for NP_001102274.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474004
    UniProtKB/TrEMBL
    A0A8I6AH86, A6JWD0
    Related
    ENSRNOP00000076250.3, ENSRNOT00000093695.3
    Conserved Domains (1) summary
    pfam12937
    Location:94138
    F-box-like

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    93490618..93555298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)