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CG42382 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35938, updated on 2-Nov-2024

Summary

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Official Symbol
CG42382provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0259728
Locus tag
Dmel_CG42382
See related
AllianceGenome:FB:FBgn0259728
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG8016; Dmel\CG42382
Old locus tag
Dmel_CG8016
Summary
Predicted to enable metal ion binding activity. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG42382 in Genome Data Viewer
Location:
45B1-45B1; 2-60 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (9166566..9167508, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (5054071..5055013, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44283 Neighboring gene uncharacterized protein Neighboring gene Rad51 recombinase D Neighboring gene Receptor mediated endocytosis 8 Neighboring gene Rab32 Neighboring gene long non-coding RNA:CR44284

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. [Drosophila gene rad201 controls cell cycle arrest in irradiated cells]. Khromykh IuM, et al. Genetika, 2001 Jun. PMID 11517775
  2. [Epigenetic effect of the rad201(G1) mutation in a system with mobilization of nonautonomous P elements in Drosophila]. Khromykh IuM, et al. Genetika, 2008 Mar. PMID 18664138
  3. Drosophila SPF45: a bifunctional protein with roles in both splicing and DNA repair. Chaouki AS, et al. PLoS Genet, 2006 Dec 8. PMID 17154718, Free PMC Article
  4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
  5. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. rad201 gene is involved in the control of the cell cycle
    Title: [Drosophila gene rad201 controls cell cycle arrest in irradiated cells].
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG42382-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    9166566..9167508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078941.5 → NP_523665.2  uncharacterized protein Dmel_CG42382 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523665.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A1Z7R9, B3DN98
    Related
    FBpp0289271
    Conserved Domains (1) summary
    smart00356
    Location:91 → 116
    ZnF_C3H1; zinc finger
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1Z7R9 A1Z7R9

Gene LinkOut

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