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Tc00.1047053511727.270 RNA-binding protein, putative [ Trypanosoma cruzi ]

Gene ID: 3551710, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053511727.270
Gene description
RNA-binding protein, putative
Locus tag
Tc00.1047053511727.270
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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See Tc00.1047053511727.270 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849566.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene cyclin 9, putative Neighboring gene hypothetical protein Neighboring gene RNA-binding protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849566.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • haploid, Esmeraldo-like haplotype

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein, putative
XP_819299.1
  • haploid, Esmeraldo-like haplotype

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849566.1 Reference assembly

    Range
    395165..395938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_814206.1 → XP_819299.1  RNA-binding protein, putative [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_819299.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2VNY2, A0A2V2XEQ8, Q4DY32
    Conserved Domains (2) summary
    cd21613
    Location:76 → 146
    RRM1_KSRP; RNA recognition motif 1 (RRM1) found in Kinetoplastid-Specific Ribosomal Protein (KSRP) and similar proteins
    cd21614
    Location:151 → 247
    RRM2_KSRP; RNA recognition motif 2 (RRM2) found in Kinetoplastid-Specific Ribosomal Protein (KSRP) and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
7ASE_J.1

Gene LinkOut

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Molecular Biology Databases
Research Materials