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Tc00.1047053506515.10 FG-GAP repeat protein, putative [ Trypanosoma cruzi ]

Gene ID: 3533475, updated on 23-Nov-2023

Summary

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Gene symbol
Tc00.1047053506515.10
Gene description
FG-GAP repeat protein, putative
Locus tag
Tc00.1047053506515.10
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trypanosoma cruzi (strain: CL Brener)
Lineage
Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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Genomic context

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See Tc00.1047053506515.10 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001849517.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene FG-GAP repeat protein, putative Neighboring gene O-sialoglycoprotein endopeptidase, putative Neighboring gene trans-sialidase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001849517.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
  2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • heterozygous, Esmeraldo-like haplotype
    allele of Tc00.1047053511321.10
    gene split across contig boundaries, should be merged with Tc00.1047053510053.79

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FG-GAP repeat protein, putative
XP_804122.1
  • heterozygous, Esmeraldo-like haplotype
    allele of Tc00.1047053511321.10
    gene split across contig boundaries, should be merged with Tc00.1047053510053.79

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001849517.1 Reference assembly

    Range
    113166..114667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_799029.1 → XP_804122.1  FG-GAP repeat protein, putative, partial [Trypanosoma cruzi]

    See identical proteins and their annotated locations for XP_804122.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2V2ULZ0, Q4CPS1
    Conserved Domains (2) summary
    pfam13360
    Location:79 → 237
    PQQ_2; PQQ-like domain
    pfam13517
    Location:165 → 221
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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