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Aoc2-ps1 amine oxidase, copper containing 2, pseudogene 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 353257, updated on 2-Nov-2024

Summary

Official Symbol
Aoc2-ps1provided by RGD
Official Full Name
amine oxidase, copper containing 2, pseudogene 1provided by RGD
Primary source
RGD:727941
See related
AllianceGenome:RGD:727941
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Rao; Aoc2
Summary
Predicted to enable primary methylamine oxidase activity. Predicted to be located in cytoplasm. Predicted to be active in plasma membrane. Orthologous to human AOC2 (amine oxidase copper containing 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Aoc2-ps1 in Genome Data Viewer
Location:
10q31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (86767268..86768734)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (86267007..86268473)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (89245590..89247056)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene cyclin N-terminal domain containing 1 Neighboring gene beclin 1 Neighboring gene proteasome activator subunit 3 Neighboring gene amine oxidase, copper containing 3 Neighboring gene uncharacterized LOC134480877 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • amine oxidase, copper containing 2 (retina-specific), pseudogene 1
  • retina-specific amine oxidase

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables primary methylamine oxidase activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033180.2 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000010

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    86767268..86768734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)