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AFUA_1G17220 extracellular polygalacturonase, putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3510122, updated on 31-Jan-2024

Summary

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Gene symbol
AFUA_1G17220
Gene description
extracellular polygalacturonase, putative
Locus tag
AFUA_1G17220
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu1g17220
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Genomic context

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See AFUA_1G17220 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_007194.1 (4706288..4707603, complement)

Chromosome 1 - NC_007194.1Genomic Context describing neighboring genes Neighboring gene nonribosomal siderophore peptide synthase SidC Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene C6 transcription factor, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007194.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pectin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular polygalacturonase, putative
XP_753090.1
  • encoded by transcript AFUA_1G17220A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007194.1 Reference assembly

    Range
    4706288..4707603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_747997.1 → XP_753090.1  extracellular polygalacturonase, putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_753090.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B0XPA1, Q4WR80
    UniProtKB/TrEMBL
    A0A222C742, A0A8H4HRL0
    Conserved Domains (1) summary
    pfam00295
    Location:56 → 378
    Glyco_hydro_28; Glycosyl hydrolases family 28
Nucleotide Protein
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