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AFUA_1G16920 beta-xylosidase XylA [ Aspergillus fumigatus Af293 ]

Gene ID: 3510092, updated on 31-Oct-2024

Summary

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Gene symbol
AFUA_1G16920
Gene description
beta-xylosidase XylA
Locus tag
AFUA_1G16920
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu1g16920
Orthologs
all
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Genomic context

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See AFUA_1G16920 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_007194.1 (4620220..4622598, complement)

Chromosome 1 - NC_007194.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene MFS multidrug transporter, putative Neighboring gene phosphatidylserine decarboxylase, putative Neighboring gene DEAD/DEAH box helicase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007194.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-arabinofuranosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylan 1,4-beta-xylosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arabinan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-xylosidase XylA
XP_753060.1
  • encoded by transcript AFUA_1G16920A
    similar to beta-xylosidase A GI:3135209) [Aspergillus oryzae] PMID: 9872754

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007194.1 Reference assembly

    Range
    4620220..4622598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_747967.1 → XP_753060.1  beta-xylosidase XylA [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_753060.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B0XP71, Q0H905, Q4WRB0
    UniProtKB/TrEMBL
    A0A9P8NGZ6
    Conserved Domains (1) summary
    PLN03080
    Location:63 → 770
    PLN03080; Probable beta-xylosidase; Provisional
Nucleotide Protein
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