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AFUA_6G08840 beta-mannosidase [ Aspergillus fumigatus Af293 ]

Gene ID: 3508060, updated on 31-Oct-2024

Summary

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Gene symbol
AFUA_6G08840
Gene description
beta-mannosidase
Locus tag
AFUA_6G08840
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu6g08840
Orthologs
all
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Genomic context

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See AFUA_6G08840 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Sequence:
Chromosome: 6; NC_007199.1 (2098222..2101265)

Chromosome 6 - NC_007199.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT core complex subunit Not4, putative Neighboring gene 2-oxoisovalerate dehydrogenase complex alpha subunit, putative Neighboring gene ubiquinone biosynthesis methlytransferase Coq5, putative Neighboring gene sugar isomerase, KpsF/GutQ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007199.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-mannosidase
XP_750773.1
  • encoded by transcript AFUA_6G08840A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007199.1 Reference assembly

    Range
    2098222..2101265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_745680.1 → XP_750773.1  beta-mannosidase [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_750773.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B0Y7S2, Q4WMS9
    UniProtKB/TrEMBL
    A0A9P8NBZ9
    Conserved Domains (3) summary
    cl30613
    Location:13 → 730
    LacZ; Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
    pfam17753
    Location:844 → 921
    Ig_mannosidase; Ig-fold domain
    pfam17786
    Location:737 → 839
    Mannosidase_ig; Mannosidase Ig/CBM-like domain
Nucleotide Protein
Heading Accession and Version

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