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AFUA_3G02090 beta-xylosidase, putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3506129, updated on 31-Oct-2024

Summary

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Gene symbol
AFUA_3G02090
Gene description
beta-xylosidase, putative
Locus tag
AFUA_3G02090
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu3g02090
Orthologs
all
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Genomic context

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See AFUA_3G02090 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_007196.1 (513250..515565)

Chromosome 3 - NC_007196.1Genomic Context describing neighboring genes Neighboring gene C2H2 transcription factor, putative Neighboring gene MFS allantoate transporter, putative Neighboring gene short-chain dehydrogenase/reductase, putative Neighboring gene MFS multidrug transporter, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007196.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-arabinofuranosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylan 1,4-beta-xylosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arabinan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-xylosidase, putative
XP_748529.1
  • encoded by transcript AFUA_3G02090A
    similar to RF:XP_753060.1: beta-xylosidase A [Aspergillus fumigatus Af293]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007196.1 Reference assembly

    Range
    513250..515565
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_743436.1 → XP_748529.1  beta-xylosidase, putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_748529.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B0Y0I4, Q4WFI6
    UniProtKB/TrEMBL
    A0A9P8NKG7
    Conserved Domains (1) summary
    PLN03080
    Location:15 → 740
    PLN03080; Probable beta-xylosidase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials