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AFUA_6G02980 extracellular exo-polygalacturonase, putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3505169, updated on 31-Jan-2024

Summary

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Gene symbol
AFUA_6G02980
Gene description
extracellular exo-polygalacturonase, putative
Locus tag
AFUA_6G02980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu6g02980
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Genomic context

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See AFUA_6G02980 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Sequence:
Chromosome: 6; NC_007199.1 (618875..620532)

Chromosome 6 - NC_007199.1Genomic Context describing neighboring genes Neighboring gene UPF0041 domain protein Neighboring gene tRNA-Thr Neighboring gene short chain dehydrogenase/reductase, putative Neighboring gene C2H2 finger domain protein (Zms1), putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007199.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular exo-polygalacturonase, putative
XP_747778.1
  • encoded by transcript AFUA_6G02980A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007199.1 Reference assembly

    Range
    618875..620532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_742685.1 → XP_747778.1  extracellular exo-polygalacturonase, putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_747778.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B0YDE8, Q4WCZ8
    UniProtKB/TrEMBL
    A0A229WNM0
    Conserved Domains (1) summary
    cl19188
    Location:37 → 423
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
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