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AFUA_4G03000 Patatin-like serine hydrolase, putative [ Aspergillus fumigatus Af293 ]

Gene ID: 3503855, updated on 31-Jan-2024

Summary

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Gene symbol
AFUA_4G03000
Gene description
Patatin-like serine hydrolase, putative
Locus tag
AFUA_4G03000
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fumigatus Af293 (strain: Af293)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Old locus tag
Afu4g03000
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Genomic context

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See AFUA_4G03000 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_007197.1 (834770..839413)

Chromosome 4 - NC_007197.1Genomic Context describing neighboring genes Neighboring gene acetyltransferase, GNAT family, putative Neighboring gene vesicle-mediated transport protein (Imh1), putative Neighboring gene hypothetical protein Neighboring gene chromatin remodeling complex subunit (Arp5), putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007197.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nierman WC, et al. Nature, 2005 Dec 22. PMID 16372009

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Patatin-like serine hydrolase, putative
XP_746486.1
  • encoded by transcript AFUA_4G03000A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007197.1 Reference assembly

    Range
    834770..839413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_741393.1 → XP_746486.1  Patatin-like serine hydrolase, putative [Aspergillus fumigatus Af293]

    See identical proteins and their annotated locations for XP_746486.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q4WA15
    UniProtKB/TrEMBL
    A0A9P8NC68, B0YER7
    Conserved Domains (2) summary
    cd00038
    Location:841 → 953
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cl11396
    Location:1207 → 1475
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

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