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Kars lysine--tRNA ligase [ Theileria parva strain Muguga ]

Gene ID: 3500340, updated on 17-May-2024

Summary

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Gene symbol
Kars
Gene description
lysine--tRNA ligase
Locus tag
TpMuguga_03g00387
See related
PiroplasmaDB:TpMuguga_03g00387; VEuPathDB:TpMuguga_03g00387
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Theileria parva strain Muguga (strain: Muguga)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Theileriidae; Theileria
Old locus tag
TP03_0387
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Genomic context

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See Kars in Genome Data Viewer
Location:
chromosome: 3, map: unlocalized
Exon count:
12

NW_876245.1Genomic Context describing neighboring genes Neighboring gene 3'-5' exonuclease family protein Neighboring gene Small nuclear ribonucleoprotein E Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_876245.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Re-annotation of the Theileria parva genome refines 53% of the proteome and uncovers essential components of N-glycosylation, a conserved pathway in many organisms. Tretina K, et al. BMC Genomics, 2020 Apr 3. PMID 32245418, Free PMC Article
  2. Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes. Gardner MJ, et al. Science, 2005 Jul 1. PMID 15994558
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lysine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lysyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysine--tRNA ligase
XP_763407.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_876245.1 Reference assembly

    Range
    799545..801848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_758314.1 → XP_763407.1  lysine--tRNA ligase [Theileria parva strain Muguga]

    See identical proteins and their annotated locations for XP_763407.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q4MZX2
    Conserved Domains (3) summary
    PLN02502
    Location:39 → 544
    PLN02502; lysyl-tRNA synthetase
    cd00775
    Location:208 → 544
    LysRS_core; Lys_tRNA synthetase (LysRS) class II core domain. Class II LysRS is a dimer which attaches a lysine to the 3' OH group of ribose of the appropriate tRNA. Its assignment to class II aaRS is based upon its structure and the presence of three ...
    cd04322
    Location:97 → 205
    LysRS_N; LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS). These enzymes are homodimeric class 2b aminoacyl-tRNA synthetases (aaRSs). This domain is a beta-barrel domain (OB fold) involved in binding the tRNA anticodon stem-loop. ...
Nucleotide Protein
Heading Accession and Version

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