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OT_ostta13g02890 Quinonprotein alcohol dehydrogenase-like superfamily [ Ostreococcus tauri ]

Gene ID: 34946348, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta13g02890
Gene description
Quinonprotein alcohol dehydrogenase-like superfamily
Locus tag
OT_ostta13g02890
Gene type
protein coding
RNA name
Quinonprotein alcohol dehydrogenase-like superfamily
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Genomic context

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See OT_ostta13g02890 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_014438.2 (505893..507182, complement)

Chromosome 13 - NC_014438.2Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolase Neighboring gene unnamed product Neighboring gene Pentatricopeptide repeat Neighboring gene Protein of unknown function DUF3422

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014438.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Quinonprotein alcohol dehydrogenase-like superfamily

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014438.2 Reference assembly

    Range
    505893..507182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022982768.1 → XP_022840259.1  Quinonprotein alcohol dehydrogenase-like superfamily [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A096P8C8
    Conserved Domains (2) summary
    sd00039
    Location:225 → 262
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:267 → 357
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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