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OT_ostta13g02520 Helicase, C-terminal [ Ostreococcus tauri ]

Gene ID: 34946343, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta13g02520
Gene description
Helicase, C-terminal
Locus tag
OT_ostta13g02520
Gene type
protein coding
RNA name
Helicase, C-terminal
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Genomic context

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See OT_ostta13g02520 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_014438.2 (435174..436595)

Chromosome 13 - NC_014438.2Genomic Context describing neighboring genes Neighboring gene Peptidase M1, alanyl aminopeptidase Neighboring gene unnamed product Neighboring gene Protein-tyrosine phosphatase-like, PTPLA Neighboring gene unnamed product

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014438.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Helicase, C-terminal

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014438.2 Reference assembly

    Range
    435174..436595
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022982750.1 → XP_022840243.1  Helicase, C-terminal [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A096P859
    Conserved Domains (1) summary
    cl26939
    Location:40 → 466
    DEXDc; DEAD-like helicases superfamily
Nucleotide Protein
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