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CG4168 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34889, updated on 22-Aug-2024

Summary

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Official Symbol
CG4168provided by FlyBase
Primary source
FLYBASE:FBgn0028888
Locus tag
Dmel_CG4168
See related
AllianceGenome:FB:FBgn0028888
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BG:DS03192.2; Dmel\CG4168
Summary
Is expressed in adult head. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG4168 in Genome Data Viewer
Location:
35C3-35C3; 2-51 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15161882..15200459, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15161882..15200459, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44771 Neighboring gene long non-coding RNA:CR44770 Neighboring gene long non-coding RNA:CR43357 Neighboring gene Seminal fluid protein 35C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Drosophila behavioral mutant, down and out (dao), is defective in an essential regulator of Erg potassium channels. Fergestad T, et al. Proc Natl Acad Sci U S A, 2010 Mar 23. PMID 20212103, Free PMC Article
  2. A natural genetic variation screen identifies insulin signaling, neuronal communication, and innate immunity as modifiers of hyperglycemia in the absence of Sirt1. Palu RAS, et al. G3 (Bethesda), 2022 May 30. PMID 35435227, Free PMC Article
  3. Drosophila convoluted/dALS is an essential gene required for tracheal tube morphogenesis and apical matrix organization. Swanson LE, et al. Genetics, 2009 Apr. PMID 19171940, Free PMC Article
  4. Transposable element dynamics and PIWI regulation impacts lncRNA and gene expression diversity in Drosophila ovarian cell cultures. Sytnikova YA, et al. Genome Res, 2014 Dec. PMID 25267525, Free PMC Article
  5. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG4168-PB
CG4168-PC
chaoptic-like

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    15161882..15200459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299024.1 → NP_001285953.1  uncharacterized protein Dmel_CG4168, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285953.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NK96, Q9VJQ0
    Conserved Domains (3) summary
    cd00116
    Location:315 → 546
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:640 → 663
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:784 → 843
    LRR_8; Leucine rich repeat

  2. NM_135896.6 → NP_609740.4  uncharacterized protein Dmel_CG4168, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609740.4

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NK96, Q9VJQ0
    Conserved Domains (3) summary
    cd00116
    Location:315 → 546
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:640 → 663
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:784 → 843
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SZT2 Q8SZT2
Q9VJQ0 Q9VJQ0

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