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Uvrag UV-resistance associated gene [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34735, updated on 2-Nov-2024

Summary

Official Symbol
Uvragprovided by FlyBase
Official Full Name
UV-resistance associated geneprovided by FlyBase
Primary source
FLYBASE:FBgn0032499
Locus tag
Dmel_CG6116
See related
AllianceGenome:FB:FBgn0032499
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6116; Dmel\CG6116; dUVRAG; uvrag; UVRAG; Vps38
Summary
Predicted to enable SNARE binding activity. Involved in several processes, including imaginal disc-derived male genitalia morphogenesis; negative regulation of Notch signaling pathway; and neuron remodeling. Predicted to be active in endosome and lytic vacuole. Is expressed in embryonic/larval garland cell; garland cell primordium; head mesoderm; organism; and trunk mesoderm. Used to study colorectal cancer. Orthologous to human UVRAG (UV radiation resistance associated). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Uvrag in Genome Data Viewer
Location:
34B4-34B4; 2-48 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13286777..13289556)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13286777..13289556)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44083 Neighboring gene antisense RNA:CR44972 Neighboring gene DNA fragmentation factor-related protein 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene headbutt Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables SNARE binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in lytic vacuole IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
UV-resistance associated gene
Names
CG6116-PA
CG6116-PB
UV radiation resistance associated
UV radiation resistance associated gene
Uvrag-PA
Uvrag-PB
ultraviolet (UV) radiation resistance-associated gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    13286777..13289556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135788.3NP_609632.1  UV-resistance associated gene, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609632.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VK07
    Related
    FBpp0080039
    Conserved Domains (1) summary
    pfam10186
    Location:329574
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14
  2. NM_001273512.1NP_001260441.1  UV-resistance associated gene, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260441.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PD33
    Conserved Domains (1) summary
    pfam10186
    Location:328573
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14