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CG16965 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34607, updated on 18-Sep-2024

Summary

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Official Symbol
CG16965provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032387
Locus tag
Dmel_CG16965
See related
AllianceGenome:FB:FBgn0032387
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG16965
Summary
Predicted to enable protein-glucosylgalactosylhydroxylysine glucosidase activity. Predicted to be involved in carbohydrate metabolic process. Is expressed in adult heart. Orthologous to human PGGHG (protein-glucosylgalactosylhydroxylysine glucosidase). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG16965 in Genome Data Viewer
Location:
33B5-33B5; 2-45 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11981591..11984380)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11981591..11984380)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA::CR43314 Neighboring gene uncharacterized protein Neighboring gene bereft Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene zucchini Neighboring gene dim gamma-tubulin 2 Neighboring gene escl

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salty dog, an SLC5 symporter, modulates Drosophila response to salt stress. Stergiopoulos K, et al. Physiol Genomics, 2009 Mar 3. PMID 19018044, Free PMC Article
  2. Identification of conserved transcriptome features between humans and Drosophila in the aging brain utilizing machine learning on combined data from the NIH Sequence Read Archive. Webb JL, et al. PLoS One, 2021. PMID 34379632, Free PMC Article
  3. Drosophila microbiota modulates host metabolic gene expression via IMD/NF-κB signaling. Erkosar B, et al. PLoS One, 2014. PMID 24733183, Free PMC Article
  4. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662
  5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, hydrolyzing O-glycosyl compounds IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein-glucosylgalactosylhydroxylysine glucosidase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG16965-PC
NP_609528.3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    11981591..11984380
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135684.5 → NP_609528.3  uncharacterized protein Dmel_CG16965 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609528.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    D3DMW0, Q9VKD9
    Conserved Domains (2) summary
    COG1554
    Location:41 → 657
    ATH1; Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism]
    pfam03632
    Location:308 → 657
    Glyco_hydro_65m; Glycosyl hydrolase family 65 central catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VKD9 Q9VKD9

Gene LinkOut

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