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RpL9 Ribosomal protein L9 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34526, updated on 28-Oct-2024

Summary

Official Symbol
RpL9provided by FlyBase
Official Full Name
Ribosomal protein L9provided by FlyBase
Primary source
FLYBASE:FBgn0015756
Locus tag
Dmel_CG6141
See related
AllianceGenome:FB:FBgn0015756
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:fe3A6; anon-WO0153538.25; anon-WO0153538.26; anon-WO0153538.27; CG6141; Dmel\CG6141; L6; L9; M(2)32D; Rp L9; rpL9; Rpl9
Summary
A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in cytosolic ribosome. Is expressed in adult head; adult heart; organism; and spermatozoon. Orthologous to human RPL9 (ribosomal protein L9). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See RpL9 in Genome Data Viewer
Location:
32C1-32C1; 2-44 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11002758..11004189, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11002758..11004189, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Tubulin tyrosine ligase-like 4A Neighboring gene aubergine Neighboring gene lectin-33A Neighboring gene Nucleoporin 154kD Neighboring gene antisense RNA:CR45778 Neighboring gene Arginine methyltransferase 8 Neighboring gene Deoxyuridine triphosphatase

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome HDA PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cytoplasmic translation IC
Inferred by Curator
more info
PubMed 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cytosolic large ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
located_in cytosolic ribosome HDA PubMed 
located_in cytosolic ribosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal protein L9
Names
CG6141-PA
CG6141-PB
CG6141-PC
RpL9-PA
RpL9-PB
RpL9-PC
anon-fast-evolving-3A6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    11002758..11004189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298897.1NP_001285826.1  ribosomal protein L9, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285826.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V0M0, P50882, Q4V5D8, Q9VKL6, Q9VKL7
    UniProtKB/TrEMBL
    X2JDU0
    Conserved Domains (1) summary
    cl30086
    Location:1189
    Ribosomal_L6; Ribosomal protein L6
  2. NM_057813.4NP_477161.1  ribosomal protein L9, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_477161.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V0M0, P50882, Q4V5D8, Q9VKL6, Q9VKL7
    UniProtKB/TrEMBL
    X2JDU0
    Related
    FBpp0079752
    Conserved Domains (1) summary
    cl30086
    Location:1189
    Ribosomal_L6; Ribosomal protein L6
  3. NM_164955.2NP_723644.1  ribosomal protein L9, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_723644.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A4V0M0, P50882, Q4V5D8, Q9VKL6, Q9VKL7
    UniProtKB/TrEMBL
    X2JDU0
    Related
    FBpp0079753
    Conserved Domains (1) summary
    cl30086
    Location:1189
    Ribosomal_L6; Ribosomal protein L6