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TBC1D16 TBC1 domain family member 16 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34431, updated on 2-Nov-2024

Summary

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Official Symbol
TBC1D16provided by FlyBase
Official Full Name
TBC1 domain family member 16provided by FlyBase
Primary source
FLYBASE:FBgn0032249
Locus tag
Dmel_CG5337
See related
AllianceGenome:FB:FBgn0032249
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG5337; Dmel\CG5337
Summary
Predicted to enable GTPase activator activity. Predicted to be active in early endosome. Orthologous to human TBC1D16 (TBC1 domain family member 16). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See TBC1D16 in Genome Data Viewer
Location:
31E2-31E2; 2-42 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10432687..10435656, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10432687..10435656, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene KDEL receptor Neighboring gene uncharacterized protein Neighboring gene Basal body up regulated gene 22 Neighboring gene Transcription factor IIB Neighboring gene hole-in-one Neighboring gene STIP1 homology and U-box containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GTPase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activator activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in early endosome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
TBC1 domain family member 16
Names
CG5337-PA
TBC1D16-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    10432687..10435656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135559.3 → NP_609403.2  TBC1 domain family member 16 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609403.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SY79, Q9VKV6
    Related
    FBpp0079633
    Conserved Domains (1) summary
    smart00164
    Location:387 → 618
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8SY79 Q8SY79
Q9VKV6 Q9VKV6

Gene LinkOut

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