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Taf11 TBP-associated factor 11 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34293, updated on 18-Sep-2024

Summary

Official Symbol
Taf11provided by FlyBase
Official Full Name
TBP-associated factor 11provided by FlyBase
Primary source
FLYBASE:FBgn0011291
Locus tag
Dmel_CG4079
See related
AllianceGenome:FB:FBgn0011291
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4079; d30beta; Dmel\CG4079; dTAFII30; dTAFII30 beta; dTAFII30beta; dTAF[[II]]30; dTAF[[II]]30beta; G3; TAF; TAF1; taf11; TAF11; TAF30b; Taf30beta; TAF30beta; TAF[II]30beta; TAF[[II]]; Taf[[II]]30beta; TAF[[II]]30beta; TFIID; TFIID 28 beta; TFIID-p28beta
Summary
Contributes to RNA polymerase II general transcription initiation factor activity. Involved in positive regulation of RNA interference. Located in cytoplasm and nucleus. Part of RISC-loading complex and transcription factor TFIID complex. Orthologous to several human genes including TAF11 (TATA-box binding protein associated factor 11). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Taf11 in Genome Data Viewer
Location:
30C7-30C7; 2-36 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9762424..9763262, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9762424..9763262, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Cytochrome P450 4e3 Neighboring gene zinc finger protein 30C Neighboring gene uninitiated Neighboring gene pickpocket 18 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of transcription factor TFIID complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of transcription factor TFIID complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 
part_of transcription factor TFIID complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
TBP-associated factor 11
Names
CG4079-PA
TBP-associated factor
TBP-associated factor 30kD subunit beta
Taf11-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    9762424..9763262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_164871.3NP_723484.1  TBP-associated factor 11 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_723484.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P49906, Q9VL90
    UniProtKB/TrEMBL
    G7H801
    Related
    FBpp0079514
    Conserved Domains (1) summary
    pfam04719
    Location:91175
    TAFII28; hTAFII28-like protein conserved region