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CG11030 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33805, updated on 2-Nov-2024

Summary

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Official Symbol
CG11030provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0031736
Locus tag
Dmel_CG11030
See related
AllianceGenome:FB:FBgn0031736
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG11030
Summary
Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Located in nucleolus and nucleoplasm. Is expressed in adult brain cell body rind. Orthologous to human NGDN (neuroguidin). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG11030 in Genome Data Viewer
Location:
25F3-25F4; 2-17 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5724656..5762420)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5724656..5762420)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene septin interacting protein 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR31912 Neighboring gene obstructor-E Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in nucleolus HDA PubMed 
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleoplasm HDA PubMed 
part_of small-subunit processome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG11030-PA
CG11030-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    5724656..5762420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001273174.1 → NP_001260103.1  uncharacterized protein Dmel_CG11030, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001260103.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B5X514, Q8IGY8, Q9VMM7
    Conserved Domains (1) summary
    pfam04000
    Location:23 → 103
    Sas10_Utp3; Sas10/Utp3/C1D family

  2. NM_135112.3 → NP_608956.1  uncharacterized protein Dmel_CG11030, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608956.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B5X514, Q8IGY8, Q9VMM7
    Related
    FBpp0078766
    Conserved Domains (1) summary
    pfam04000
    Location:23 → 103
    Sas10_Utp3; Sas10/Utp3/C1D family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IGY8 Q8IGY8
Q9VMM7 Q9VMM7

Gene LinkOut

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