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cgd6_2170 60S ribosomal protein L11 [ Cryptosporidium parvum Iowa II ]

Gene ID: 3376168, updated on 17-May-2024

Summary

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Gene symbol
cgd6_2170
Gene description
60S ribosomal protein L11
Locus tag
cgd6_2170
See related
ApiDB_CryptoDB:cgd6_2170; CryptoDB:cgd6_2170; VEuPathDB:cgd6_2170
Gene type
protein coding
RNA name
60S ribosomal protein L11
RefSeq status
PROVISIONAL
Organism
Cryptosporidium parvum Iowa II (isolate: Iowa type II)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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Genomic context

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Location:
chromosome: 6
Exon count:
1
Sequence:
Chromosome: 6; NC_006985.1 (517625..518143, complement)

Chromosome 6 - NC_006985.1Genomic Context describing neighboring genes Neighboring gene U1 snrnp Neighboring gene hypothetical protein Neighboring gene Fun12p GTpase; translation initiation factor IF2 Neighboring gene TBC domain containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006985.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
60S ribosomal protein L11

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006985.1 Reference assembly

    Range
    517625..518143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_627575.1 → XP_627575.1  60S ribosomal protein L11 [Cryptosporidium parvum Iowa II]

    See identical proteins and their annotated locations for XP_627575.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5CX79, Q7YYH5
    Conserved Domains (1) summary
    PTZ00156
    Location:1 → 172
    PTZ00156; 60S ribosomal protein L11; Provisional
Nucleotide Protein
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