U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cgd4_2550 farnesyl pyrophosphate synthase [ Cryptosporidium parvum Iowa II ]

Gene ID: 3372978, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
cgd4_2550
Gene description
farnesyl pyrophosphate synthase
Locus tag
cgd4_2550
See related
ApiDB_CryptoDB:cgd4_2550; CryptoDB:cgd4_2550; VEuPathDB:cgd4_2550
Gene type
protein coding
RNA name
putative farnesyl pyrophosphate synthase
RefSeq status
PROVISIONAL
Organism
Cryptosporidium parvum Iowa II (isolate: Iowa type II)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_006983.1 (589017..590171, complement)

Chromosome 4 - NC_006983.1Genomic Context describing neighboring genes Neighboring gene possible transmembrane domain near C Neighboring gene 26S proteasome regulatory subunit 26b like AAA ATpase Neighboring gene phospholipase C, delta 1 ortholog with 2 EF hands plus phospholipase C domain plus C2 domain Neighboring gene WD repeat protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_006983.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dimethylallyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables geranyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
farnesyl pyrophosphate synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006983.1 Reference assembly

    Range
    589017..590171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_625843.1 → XP_625843.1  farnesyl pyrophosphate synthase [Cryptosporidium parvum Iowa II]

    See identical proteins and their annotated locations for XP_625843.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7S7LI62, Q5CR09
    Conserved Domains (1) summary
    cl00210
    Location:81 → 329
    Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials