dnajc21 DnaJ heat shock protein family (Hsp40) member C21 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: dnajc21provided by ZNC
Official Full Name: DnaJ heat shock protein family (Hsp40) member C21provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-8928
See related: Ensembl:ENSDARG00000105195 AllianceGenome:ZFIN:ZDB-GENE-030131-8928
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa66c02; zgc:63563; wu:fa66c02
Summary: Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be active in cytoplasm. Orthologous to human DNAJC21 (DnaJ heat shock protein family (Hsp40) member C21). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 21

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	21	NC_007132.7 (11179912..11199366, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	21	NC_007132.6 (11087284..11106738, complement)

Chromosome 21 - NC_007132.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: dnaJ homolog subfamily C member 21

Names: DnaJ (Hsp40) homolog, subfamily C, member 21; dnaJ homolog subfamily A member 5; dnaja5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200044.1 → NP_956338.1 dnaJ homolog subfamily C member 21

See identical proteins and their annotated locations for NP_956338.1

Status: PROVISIONAL

Source sequence(s)

BC056785

UniProtKB/Swiss-Prot

Q6PGY5

Related

ENSDARP00000140903.1, ENSDART00000167666.3

Conserved Domains (4) summary

sd00020
Location:325 → 347

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00226
Location:3 → 66

DnaJ; DnaJ domain

pfam12171
Location:323 → 348

zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

pfam13892
Location:183 → 246

DBINO; DNA-binding domain