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nrsn1 neurensin 1 [ Danio rerio (zebrafish) ]

Gene ID: 335551, updated on 28-Oct-2024

Summary

Official Symbol
nrsn1provided by ZNC
Official Full Name
neurensin 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7491
See related
Ensembl:ENSDARG00000111235 AllianceGenome:ZFIN:ZDB-GENE-030131-7491
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj21c11; zgc:73062; wu:fj21c11
Summary
Predicted to be involved in nervous system development. Predicted to be located in membrane. Predicted to be active in neuron projection; neuronal cell body; and transport vesicle. Is expressed in central nervous system and sensory system. Orthologous to human NRSN1 (neurensin 1). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See nrsn1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (217950..226654)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (330980..339684)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 4b Neighboring gene si:ch211-201o1.1 Neighboring gene uncharacterized LOC553446 Neighboring gene solute carrier family 6 member 3

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in nervous system development IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in neuronal cell body IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in transport vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in transport vesicle IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199959.1NP_956253.1  neurensin-1

    See identical proteins and their annotated locations for NP_956253.1

    Status: PROVISIONAL

    Source sequence(s)
    BC060899
    UniProtKB/TrEMBL
    A0A8M1PDR6, Q6P976
    Related
    ENSDARP00000145357.1, ENSDART00000180243.1
    Conserved Domains (1) summary
    pfam14927
    Location:27155
    Neurensin; Neurensin

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    217950..226654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)