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CG12567 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3355094, updated on 18-Sep-2024

Summary

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Official Symbol
CG12567provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0039958
Locus tag
Dmel_CG12567
See related
AllianceGenome:FB:FBgn0039958
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12567
Summary
Predicted to enable 8-oxo-dGDP phosphatase activity. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG12567 in Genome Data Viewer
Location:
40F7-40F7; 2-54 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (23161122..23174484, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2LHet NW_001848855.1 (19633..32995, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43242 Neighboring gene Spf45 Neighboring gene long non-coding RNA:CR44268 Neighboring gene long non-coding RNA:CR46450 Neighboring gene mir-2490 stem loop Neighboring gene long non-coding RNA:CR46253

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Rossi F, et al. Genetics, 2007 Feb. PMID 17110485, Free PMC Article
  2. Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila. Caizzi R, et al. PLoS Genet, 2016 Aug. PMID 27513559, Free PMC Article
  3. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article
  4. SUMO-Enriched Proteome for Drosophila Innate Immune Response. Handu M, et al. G3 (Bethesda), 2015 Aug 18. PMID 26290570, Free PMC Article
  5. circRNA biogenesis competes with pre-mRNA splicing. Ashwal-Fluss R, et al. Mol Cell, 2014 Oct 2. PMID 25242144

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables 8-oxo-dGDP phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG12567-PA
CG12567-PC
CG12567-PD
CG12567-PE
CG12567-PF
CG12567-PG
NP_001015383.3
NP_001015384.1
NP_001104331.1
NP_001163833.1
NP_001163834.1
NP_001287633.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    23161122..23174484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001015383.2 → NP_001015383.3  uncharacterized protein Dmel_CG12567, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001015383.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q5LJU4, Q8SZ06
    Conserved Domains (2) summary
    cd03676
    Location:98 → 275
    Nudix_hydrolase_3; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    pfam15916
    Location:22 → 128
    DUF4743; Domain of unknown function (DUF4743)

  2. NM_001110861.3 → NP_001104331.1  uncharacterized protein Dmel_CG12567, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001104331.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8Y4U4
    Conserved Domains (1) summary
    pfam15916
    Location:11 → 64
    DUF4743; Domain of unknown function (DUF4743)

  3. NM_001015384.3 → NP_001015384.1  uncharacterized protein Dmel_CG12567, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001015384.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PLS1
    Conserved Domains (2) summary
    cd03676
    Location:106 → 283
    Nudix_hydrolase_3; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    pfam15916
    Location:11 → 136
    DUF4743; Domain of unknown function (DUF4743)

  4. NM_001170363.2 → NP_001163834.1  uncharacterized protein Dmel_CG12567, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163834.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D2A6J3
    Conserved Domains (1) summary
    pfam15916
    Location:11 → 64
    DUF4743; Domain of unknown function (DUF4743)

  5. NM_001300704.1 → NP_001287633.1  uncharacterized protein Dmel_CG12567, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287633.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PLS1
    Conserved Domains (2) summary
    cd03676
    Location:106 → 283
    Nudix_hydrolase_3; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    pfam15916
    Location:11 → 136
    DUF4743; Domain of unknown function (DUF4743)

  6. NM_001170362.1 → NP_001163833.1  uncharacterized protein Dmel_CG12567, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163833.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D2A6J2
    Conserved Domains (2) summary
    cd03676
    Location:92 → 269
    Nudix_hydrolase_3; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    pfam15916
    Location:16 → 122
    DUF4743; Domain of unknown function (DUF4743)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8Y4U4 A8Y4U4
D2A6J2 D2A6J2
D2A6J3 D2A6J3
Q7PLS1 Q7PLS1
Q8SZ06 Q8SZ06

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